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Pairwise Comparison DB

Select ---------------------- Manual PTT Viewer Protein PCDB DNA PCDB GBK Viewer

Genome Annotation

Select ---------------------- CGAS

Genome Comparison

Select ---------------------- Manual GenomePlot ---------------------- mgALIGN ---------------------- Manual GAME ---------------------- Manual COMPAM

Gene Neighborhood

Select ---------------------- Manual EGGS MCGS OperonViz-COG OperonViz-BAG

Gene Fusion

Select ---------------------- Manual FuzFinder

Metabolic Pathway

Select ---------------------- ComPath ---------------------- Manual MetaPath

Sequence Clustering

Select ---------------------- About BAG Parameters ---------------------- Genome-BAG(CLASSEQ) FASTA-BAG BLAST-BAG

Motif Discovery

Select ---------------------- iGibbs ---------------------- arcs

Reference Databases

Select ---------------------- NCBI EMBL-EBI Gene Ontology STRING ---------------------- PDB PFAM CDD ProDom CDD UniProt PIR FusionDB SCOP SUPERFAMILY CATH EC→PDB ENZYME SFLD GTOP ---------------------- BioCyc KEGG DIP BRENDA CGAP SDDB BioCarta CASE Pathways Signaling Path. DB MIST REACTOME PathGuide

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Kwangmin Choi

YoungIk Yang

Bharath Kumar Maryada

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Indiana University

Haifeng Zhao