Multiple Genome Alignment Web Service
NC_003070 Arabidopsis thaliana chromosome 1, complete sequence.
NC_003071 Arabidopsis thaliana chromosome 2, complete sequence.
NC_003074 Arabidopsis thaliana chromosome 3, complete sequence.
NC_003075 Arabidopsis thaliana chromosome 4, complete sequence.
NC_003076 Arabidopsis thaliana chromosome 5, complete sequence.
NC_000854 Aeropyrum pernix, complete genome.
NC_003062 Agrobacterium tumefaciens strain C58 circular chromosome, complete
NC_003063 Agrobacterium tumefaciens strain C58 linear chromosome, complete
NC_003064 Agrobacterium tumefaciens strain C58 plasmid AT, complete sequence.
NC_003065 Agrobacterium tumefaciens str. C58 (Cereon) plasmid Ti, complete
NC_003304 Agrobacterium tumefaciens str. C58 (U. Washington) chromosome
NC_003305 Agrobacterium tumefaciens str. C58 (U. Washington) chromosome
NC_003306 Agrobacterium tumefaciens str. C58 (U. Washington) plasmid AT,
NC_003308 Agrobacterium tumefaciens str. C58 (U. Washington) plasmid Ti,
NC_000918 Aquifex aeolicus complete genome.
NC_001880 Aquifex aeolicus plasmid ece1, complete sequence.
NC_000917 Archaeoglobus fulgidus DSM 4304, complete genome.
NC_003980 Bacillus anthracis str. A2012 plasmid pXO1, complete sequence.
NC_003981 Bacillus anthracis str. A2012 plasmid pXO2, complete sequence.
NC_003995 Bacillus anthracis A2012, unfinished sequence, whole genome shotgun
NC_003997 Bacillus anthracis str. Ames, complete genome.
NC_004721 Bacillus cereus ATCC 14579 plasmid pBClin15, complete sequence.
NC_004722 Bacillus cereus ATCC 14579, complete genome.
NC_003909 Bacillus cereus ATCC 10987, complete genome.
NC_002570 Bacillus halodurans, complete genome.
NC_000964 Bacillus subtilis, complete genome.
NC_004663 Bacteroides thetaiotaomicron VPI-5482, complete genome.
NC_005363 Bdellovibrio bacteriovorus HD100, complete genome.
NC_004307 Bifidobacterium longum NCC2705, complete genome.
NC_005061 Candidatus Blochmannia floridanus, complete genome.
NC_002927 Bordetella bronchiseptica RB50, complete genome.
NC_002928 Bordetella parapertussis 12822, complete genome.
NC_002929 Bordetella pertussis Tohama I, complete genome.
NC_000948 Borrelia burgdorferi B31 plasmid cp32-1, complete sequence.
NC_000949 Borrelia burgdorferi B31 plasmid cp32-3, complete sequence.
NC_000950 Borrelia burgdorferi B31 plasmid cp32-4, complete sequence.
NC_000951 Borrelia burgdorferi B31 plasmid cp32-6, complete sequence.
NC_000952 Borrelia burgdorferi B31 plasmid cp32-7, complete sequence.
NC_000953 Borrelia burgdorferi B31 plasmid cp32-8, complete sequence.
NC_000954 Borrelia burgdorferi B31 plasmid cp32-9, complete sequence.
NC_000955 Borrelia burgdorferi B31 plasmid lp21, complete sequence.
NC_000956 Borrelia burgdorferi B31 plasmid lp56, complete sequence.
NC_000957 Borrelia burgdorferi B31 plasmid lp5, complete sequence.
NC_001318 Borrelia burgdorferi, complete genome.
NC_001849 Borrelia burgdorferi plasmid lp17, complete sequence.
NC_001850 Borrelia burgdorferi plasmid lp25, complete sequence.
NC_001851 Borrelia burgdorferi plasmid lp28-1, complete sequence.
NC_001852 Borrelia burgdorferi plasmid lp28-2, complete sequence.
NC_001853 Borrelia burgdorferi plasmid lp28-3, complete sequence.
NC_001854 Borrelia burgdorferi plasmid lp28-4, complete sequence.
NC_001855 Borrelia burgdorferi plasmid lp36, complete sequence.
NC_001856 Borrelia burgdorferi plasmid lp38, complete sequence.
NC_001857 Borrelia burgdorferi plasmid lp54, complete sequence.
NC_001903 Borrelia burgdorferi plasmid cp26, complete sequence.
NC_001904 Borrelia burgdorferi plasmid cp9, complete sequence.
NC_004463 Bradyrhizobium japonicum, complete genome.
NC_003317 Brucella melitensis chromosome I, complete sequence.
NC_003318 Brucella melitensis chromosome II, complete sequence.
NC_004310 Brucella suis 1330 chromosome I, complete sequence.
NC_004311 Brucella suis 1330 chromosome II, complete sequence.
NC_004545 Buchnera aphidicola (Baizongia pistaciae), complete genome.
NC_004061 Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome.
NC_002252 Buchnera sp. APS plasmid pTrp, complete sequence.
NC_002253 Buchnera sp. APS plasmid pLeu, complete sequence.
NC_002528 Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete
NC_002163 Campylobacter jejuni subsp. jejuni NCTC 11168, complete genome.
NC_002696 Caulobacter crescentus CB15, complete genome.
NC_002182 Chlamydia muridarum plasmid pMoPn, complete sequence.
NC_002620 Chlamydia muridarum, complete genome.
NC_000117 Chlamydia trachomatis, complete genome.
NC_003361 Chlamydophila caviae GPIC, complete genome.
NC_004720 Chlamydophila caviae GPIC plasmid pCpGP1, complete sequence.
NC_002179 Chlamydia pneumoniae AR39, complete genome.
NC_000922 Chlamydophila pneumoniae CWL029 complete genome.
NC_002491 Chlamydophila pneumoniae J138, complete genome.
NC_005043 Chlamydophila pneumoniae TW-183, complete genome.
NC_002932 Chlorobium tepidum TLS, complete genome.
NC_005085 Chromobacterium violaceum ATCC 12472, complete genome.
NC_001988 Clostridium acetobutylicum plasmid pSOL1, complete sequence.
NC_003030 Clostridium acetobutylicum ATCC824 complete genome.
NC_003042 Clostridium perfringens str. 13 plasmid pCP13, complete sequence.
NC_003366 Clostridium perfringens, complete genome.
NC_004557 Clostridium tetani E88, complete genome.
NC_002935 Corynebacterium diphtheriae, complete genome.
NC_004369 Corynebacterium efficiens YS-314, complete genome.
NC_003450 Corynebacterium glutamicum ATCC 13032, complete genome.
NC_002971 Coxiella burnetii RSA 493, complete genome.
NC_000958 Deinococcus radiodurans plasmid MP1, complete sequence.
NC_000959 Deinococcus radiodurans plasmid CP1, complete sequence.
NC_001263 Deinococcus radiodurans chromosome 1, complete sequence.
NC_001264 Deinococcus radiodurans chromosome 2, complete sequence.
NC_002937 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
NC_005863 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
NC_004668 Enterococcus faecalis V583, complete genome.
NC_004431 Escherichia coli CFT073, complete genome.
NC_000913 Escherichia coli K12, complete genome.
NC_002127 Escherichia coli O157:H7 plasmid pOSAK1, complete sequence.
NC_002128 Escherichia coli O157:H7 plasmid pO157, complete sequence.
NC_002695 Escherichia coli O157:H7, complete genome.
NC_002655 Escherichia coli O157:H7 EDL933, complete genome.
NC_003454 Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete
NC_002939 Geobacter sulfurreducens PCA, complete genome.
NC_005125 Gloeobacter violaceus, complete genome.
NC_002940 Haemophilus ducreyi 35000HP, complete genome.
NC_000907 Haemophilus influenzae Rd, complete genome.
NC_001869 Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence.
NC_002607 Halobacterium sp. NRC-1, complete genome.
NC_002608 Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
NC_004917 Helicobacter hepaticus ATCC 51449, complete genome.
NC_000915 Helicobacter pylori 26695, complete genome.
NC_000921 Helicobacter pylori, strain J99 complete genome.
NC_005362 Lactobacillus johnsonii NCC 533, complete genome.
NC_004567 Lactobacillus plantarum WCFS1, complete genome.
NC_002662 Lactococcus lactis subsp. lactis, complete genome.
NC_004342 Leptospira interrogans serovar lai str. 56601 chromosome I,
NC_004343 Leptospira interrogans serovar lai str. 56601 chromosome II,
NC_005823 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
NC_005824 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
NC_003212 Listeria innocua Clip11262, complete genome.
NC_003383 Listeria innocua plasmid pLI100, complete sequence.
NC_003210 Listeria monocytogenes strain EGD, complete genome.
NC_002973 Listeria monocytogenes str. 4b F2365, complete genome.
NC_002678 Mesorhizobium loti, complete genome.
NC_002679 Mesorhizobium loti plasmid pMLa, complete sequence.
NC_002682 Mesorhizobium loti plasmid pMLb, complete sequence.
NC_000916 Methanobacterium thermoautotrophicum str. Delta H complete genome.
NC_000909 Methanococcus jannaschii complete genome.
NC_001732 Methanocaldococcus jannaschii extrachrom large extra-chromosomal
NC_001733 Methanocaldococcus jannaschii extrachrom small extra-chromosomal
NC_005791 Methanococcus maripaludis, complete genome.
NC_003551 Methanopyrus kandleri AV19, complete genome.
NC_003552 Methanosarcina acetivorans str. C2A, complete genome.
NC_003901 Methanosarcina mazei strain Goe1, complete genome.
NC_002944 Mycobacterium avium subsp. paratuberculosis str. k10, complete
NC_002945 Mycobacterium bovis subsp. bovis AF2122/97, complete genome.
NC_002677 Mycobacterium leprae strain TN complete genome.
NC_002755 Mycobacterium tuberculosis CDC1551, complete genome.
NC_000962 Mycobacterium tuberculosis H37Rv, complete genome.
NC_004829 Mycoplasma gallisepticum R, complete genome.
NC_000908 Mycoplasma genitalium, complete genome.
NC_005364 Mycoplasma mycoides subsp. mycoides SC, complete genome.
NC_004432 Mycoplasma penetrans, complete genome.
NC_000912 Mycoplasma pneumoniae, complete genome.
NC_002771 Mycoplasma pulmonis complete genome.
NC_005213 Nanoarchaeum equitans Kin4-M, complete genome.
NC_003112 Neisseria meningitidis serogroup B strain MC58 complete genome.
NC_003116 Neisseria meningitidis serogroup A strain Z2491 complete genome.
NC_004757 Nitrosomonas europaea ATCC 19718, complete genome.
NC_003240 Nostoc sp. PCC 7120 plasmid pCC7120beta, complete sequence.
NC_003241 Nostoc sp. PCC 7120 plasmid pCC7120zeta, complete sequence.
NC_003267 Nostoc sp. PCC 7120 plasmid pCC7120gamma, complete sequence.
NC_003270 Nostoc sp. PCC 7120 plasmid pCC7120epsilon, complete sequence.
NC_003272 Nostoc sp. PCC 7120 complete genome.
NC_003273 Nostoc sp. PCC 7120 plasmid pCC7120delta, complete sequence.
NC_003276 Nostoc sp. PCC 7120 plasmid pCC7120alpha, complete sequence.
NC_004193 Oceanobacillus iheyensis HTE831, complete genome.
NC_005303 Onion yellows phytoplasma, complete genome.
NC_005861 Parachlamydia sp. UWE25, complete genome.
NC_002663 Pasteurella multocida, complete genome.
NC_005126 Photorhabdus luminescens subsp. laumondii TTO1, complete genome.
NC_005027 Pirellula sp., complete genome.
NC_002950 Porphyromonas gingivalis W83, complete genome.
NC_005042 Prochlorococcus marinus subsp. marinus str. CCMP1375, complete
NC_005072 Prochlorococcus marinus subsp. pastoris str. CCMP1378, complete
NC_005071 Prochlorococcus marinus str. MIT 9313, complete genome.
NC_002516 Pseudomonas aeruginosa PA01, complete genome.
NC_002947 Pseudomonas putida KT2440, complete genome.
NC_004578 Pseudomonas syringae pv. tomato str. DC3000, complete genome.
NC_003364 Pyrobaculum aerophilum, complete genome.
NC_000868 Pyrococcus abyssi, complete genome.
NC_003413 Pyrococcus furiosus DSM 3638, complete genome.
NC_000961 Pyrococcus horikoshii, complete genome.
NC_003295 Ralstonia solanacearum, complete genome.
NC_003296 Ralstonia solanacearum strain GMI1000 megaplasmid pGMI1000MP,
NC_005296 Rhodopseudomonas palustris, complete genome.
NC_003103 Rickettsia conorii Malish 7, complete genome.
NC_000963 Rickettsia prowazekii strain Madrid E, complete genome.
NC_003198 Salmonella enterica subsp. enterica serovar Typhi, complete genome.
NC_003384 Salmonella enterica subsp. enterica serovar Typhi plasmid pHCM1,
NC_003385 Salmonella enterica subsp. enterica serovar Typhi plasmid pHCM2,
NC_004631 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete
NC_003197 Salmonella typhimurium LT2, complete genome.
NC_003277 Salmonella typhimurium LT2 plasmid pSLT, complete sequence.
NC_004347 Shewanella oneidensis MR-1, complete genome.
NC_004349 Shewanella oneidensis MR-1 megaplasmid pMR-1, complete sequence.
NC_004337 Shigella flexneri 2a str. 301, complete genome.
NC_004741 Shigella flexneri 2a str. 2457T, complete genome.
NC_003037 Sinorhizobium meliloti plasmid pSymA, complete sequence.
NC_003047 Sinorhizobium meliloti 1021 complete genomes.
NC_003078 Sinorhizobium meliloti plasmid pSymB, complete sequence.
NC_003923 Staphylococcus aureus subsp. aureus MW2, complete genome.
NC_002758 Staphylococcus aureus strain Mu50, complete genome.
NC_002774 Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete
NC_002745 Staphylococcus aureus subsp. aureus N315, complete genome.
NC_003140 Staphylococcus aureus subsp. aureus N315 plasmid pN315, complete
NC_004116 Streptococcus agalactiae 2603V/R, complete genome.
NC_004461 Staphylococcus epidermidis ATCC 12228, complete genome.
NC_004368 Streptococcus agalactiae NEM316, complete genome.
NC_004350 Streptococcus mutans UA159, complete genome.
NC_003098 Streptococcus pneumoniae R6 complete genome.
NC_003028 Streptococcus pneumoniae, complete genome.
NC_002737 Streptococcus pyogenes, complete genome.
NC_004070 Streptococcus pyogenes MGAS315, complete genome.
NC_003485 Streptococcus pyogenes strain MGAS8232, complete genome.
NC_004606 Streptococcus pyogenes SSI-1, complete genome.
NC_003155 Streptomyces avermitilis MA-4680, complete genome.
NC_004719 Streptomyces avermitilis MA-4680 plasmid SAP1, complete sequence.
NC_003888 Streptomyces coelicolor A3(2), complete genome.
NC_003903 Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence.
NC_003904 Streptomyces coelicolor A3(2) plasmid SCP2, complete sequence.
NC_002754 Sulfolobus solfataricus, complete genome.
NC_003106 Sulfolobus tokodaii, complete genome.
NC_005070 Synechococcus sp. WH 8102, complete genome.
NC_000911 Synechocystis sp. PCC 6803, complete genome.
NC_003869 Thermoanaerobacter tengcongensis strain MB4T, complete genome.
NC_002578 Thermoplasma acidophilum, complete genome.
NC_002689 Thermoplasma volcanium, complete genome.
NC_004113 Thermosynechococcus elongatus BP-1, complete genome.
NC_000853 Thermotoga maritima, complete genome.
NC_005835 Thermus thermophilus HB27, complete genome.
NC_002967 Treponema denticola ATCC 35405, complete genome.
NC_000919 Treponema pallidum subsp. pallidum str. Nichols complete genome.
NC_004551 Tropheryma whipplei TW08/27, complete genome.
NC_004572 Tropheryma whipplei str. Twist, complete genome.
NC_002162 Ureaplasma urealyticum, complete genome.
NC_002505 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete
NC_002506 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete
NC_004603 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete
NC_004605 Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete
NC_004459 Vibrio vulnificus CMCP6 chromosome I, complete sequence.
NC_004460 Vibrio vulnificus CMCP6 chromosome II, complete sequence.
NC_005128 Vibrio vulnificus YJ016 plasmid pYJ016, complete sequence.
NC_005139 Vibrio vulnificus YJ016 chromosome I, complete sequence.
NC_005140 Vibrio vulnificus YJ016 chromosome II, complete sequence.
NC_004344 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,
NC_002978 Wolbachia endosymbiont of Drosophila melanogaster, complete genome.
NC_005090 Wolinella succinogenes, complete genome.
NC_003902 Xanthomonas campestris pv. campestris str. ATCC 33913, complete
NC_003919 Xanthomonas axonopodis pv. citri str. 306, complete genome.
NC_002488 Xylella fastidiosa 9a5c, complete genome.
NC_002489 Xylella fastidiosa plasmid pXF1.3, complete sequence.
NC_002490 Xylella fastidiosa plasmid pXF51, complete sequence.
NC_004554 Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence.
NC_004556 Xylella fastidiosa Temecula1, complete genome.
NC_003131 Yersinia pestis CO92 plasmid pCD1, complete sequence.
NC_003132 Yersinia pestis CO92 plasmid pPCP1, complete sequence.
NC_003134 Yersinia pestis CO92 plasmid pMT1, complete sequence.
NC_003143 Yersinia pestis strain CO92, complete genome.
NC_004088 Yersinia pestis KIM, complete genome.
NC_005810 Yersinia pestis biovar Mediaevails str. 91001, complete genome.
NC_005813 Yersinia pestis biovar Mediaevails str. 91001 plasmid pCD1,
NC_005814 Yersinia pestis biovar Mediaevails str. 91001 plasmid pCRY,
NC_005815 Yersinia pestis biovar Mediaevails str. 91001 plasmid pMT1,
NC_005816 Yersinia pestis biovar Mediaevails str. 91001 plasmid pPCP1,
NC_003279 Caenorhabditis elegans chromosome I, complete sequence.
NC_004325 Plasmodium falciparum 3D7, complete genome.
NC_004314 Plasmodium falciparum 3D7 chromosome 10, complete sequence.
NC_004315 Plasmodium falciparum 3D7 chromosome 11, complete sequence.
NC_004316 Plasmodium falciparum 3D7 chromosome 12, complete sequence.
NC_004331 Plasmodium falciparum 3D7 chromosome 13, *** SEQUENCING IN PROGRESS
NC_004317 Plasmodium falciparum 3D7 chromosome 14, complete sequence.
NC_000910 Plasmodium falciparum 3D7 chromosome 2, complete sequence.
NC_000521 Plasmodium falciparum 3D7, complete genome.
NC_004318 Plasmodium falciparum 3D7 chromosome 4, complete sequence.
NC_004326 Plasmodium falciparum 3D7 chromosome 5, complete sequence.
NC_004327 Plasmodium falciparum 3D7 chromosome 6, *** SEQUENCING IN PROGRESS
NC_004328 Plasmodium falciparum 3D7 chromosome 7, *** SEQUENCING IN PROGRESS
NC_004329 Plasmodium falciparum 3D7 chromosome 8, *** SEQUENCING IN PROGRESS
NC_004330 Plasmodium falciparum 3D7, complete genome.
NC_001133 Saccharomyces cerevisiae chromosome I, complete chromosome
NC_001134 Saccharomyces cerevisiae chromosome II, complete chromosome
NC_001135 Saccharomyces cerevisiae chromosome III, complete chromosome
NC_001136 Saccharomyces cerevisiae chromosome IV, complete chromosome
NC_001141 Saccharomyces cerevisiae chromosome IX, complete chromosome
NC_001224 Saccharomyces cerevisiae mitochondrion, complete genome.
NC_001137 Saccharomyces cerevisiae chromosome V, complete chromosome
NC_001138 Saccharomyces cerevisiae chromosome VI, complete chromosome
NC_001139 Saccharomyces cerevisiae chromosome VII, complete chromosome
NC_001140 Saccharomyces cerevisiae chromosome VIII, complete chromosome
NC_001142 Saccharomyces cerevisiae chromosome X, complete chromosome
NC_001143 Saccharomyces cerevisiae chromosome XI, complete chromosome
NC_001144 Saccharomyces cerevisiae chromosome XII, complete chromosome
NC_001145 Saccharomyces cerevisiae chromosome XIII, complete chromosome
NC_001146 Saccharomyces cerevisiae chromosome XIV, complete chromosome
NC_001147 Saccharomyces cerevisiae chromosome XV, complete chromosome
NC_001148 Saccharomyces cerevisiae chromosome XVI, complete chromosome
NT_033778 Drosophila melanogaster chromosome 2R, complete sequence.
NT_033779 Drosophila melanogaster chromosome 2L complete sequence.
NT_033777 Drosophila melanogaster chromosome 3R, complete sequence.
NT_037436 Drosophila melanogaster chromosome 3L, complete sequence.
NC_004353 Drosophila melanogaster chromosome 4 complete sequence.
NC_004354 Drosophila melanogaster chromosome X complete sequence.
NC_003229 Encephalitozoon cuniculi chromosome II, complete sequence.
NC_003230 chromosome III of strain GB-M1 of Encephalitozoon cuniculi
NC_003231 Encephalitozoon cuniculi chromosome IV, complete sequence.
NC_003232 chromosome V of strain GB-M1 of Encephalitozoon cuniculi
NC_003233 Encephalitozoon cuniculi chromosome VI, complete sequence.
NC_003234 Encephalitozoon cuniculi chromosome VII, complete sequence.
NC_003235 chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi
NC_003236 Encephalitozoon cuniculi chromosome X, complete sequence.
NC_003237 Encephalitozoon cuniculi chromosome XI, complete sequence.
NC_003238 chromosome IX of strain GB-M1 of Encephalitozoon cuniculi
NC_003242 Encephalitozoon cuniculi chromosome I, complete sequence.
NC_003424 Schizosaccharomyces pombe chromosome I, complete sequence.
NC_003423 S.pombe chromosome II.
NC_003421 Schizosaccharomyces pombe chromosome III, complete sequence.
Kwangmin Choi @ School of Informatics, Indiana University, Bloomington, IN, USA